Software Engineer (SWE), Agents

Job overview

The Software Engineer (SWE), Agents role is listed in New York, NY; the posting does not specify a remote arrangement. The stated compensation range is $150,000–$300,000 per year. Output Biosciences is developing biological reasoning models and describes work aimed at enabling drug treatments beyond traditional approaches. The engineer builds the agent infrastructure that turns model capabilities into usable tools and workflows. The role supports researchers and external systems through orchestration, inference serving, APIs, integrations, and internal research tools.

What you'll do

• Build agent orchestration for multi-step workflows
• implement agent skills and tools
• develop efficient inference infrastructure
• design APIs and integrations, including MCP-compatible interfaces
• build research tools and evaluation pipelines
• and maintain testing, CI/CD, code review, and documentation practices.

What we're looking for

Skills & competencies

software engineer

agents

new york ny

output biosciences

python

ai and biology

agent orchestration

llm systems

inference infrastructure

apis

mcp

$150,000–$300,000 per year

Work arrangement

• Weekend coverage required

Benefits & perks

• Medical, dental, and vision coverage
• equity
• and a feedback-focused environment with day-to-day management autonomy are stated.

Why this role

The role spans agent orchestration, model inference, researcher tooling, and external integrations in an AI-and-biology company.

About the employer

Output Biosciences is hiring for this role. Industry: Research and Development in the Physical, Engineering, and Life Sciences (except Nanotechnology and Biotechnology). Sector: 54.